Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943152.1_cds_XP_016486411.1_77253
CDS Infomation

[gene=LOC107806705] [db_xref=GeneID:107806705] [protein=uncharacterized protein LOC107806705 isoform X3] [protein_id=XP_016486411.1] [location=complement(join(53169..53780,55163..55599,55869..56060,56275..56433,56535..57062,57361..57424))] [gbkey=CDS]
Sequence

ATGGAAAATTTGTACAGTTTAGCAGCCAGAACAAACCGGAGTAGCTTCGAAGAAATCGGT
GAAGAGAACATAAATGAGGAGAAGAAGTTGTGGGGATGCTTGCCTTTATACCGTGCATTA
CTCAGAGAAAACCAGAGTGGTTTTGAAAAAGAAGCTAAAGCTCTCTCGAAATTTCCACCA
GATGTGACTATATGTAGGAAGGTAACAAGAGCTGGGGACACTGGCCTTCACGTACTTGTT
GGTGCTGGAAAGTGGTATGATTCTGTGATAAGTAAACCAAAAAGTTATGCATTAGAAGGG
TTGGTTATTCGTAACAACAATGGTCATACACCTCTTTGTGTGGCTGCAAAGGTTGGGAAC
ATGGAGGCTGCCAAGAAGTTGCTGCAACTTGAAACGGAAATCCGGAGTGTGCGAGCGACT
GACGACGATACTGTTGGGCGGTATCCGATTATAGAGGCTGCTAGATATGGCCATAAGGAG
ATGGTTTTACTTTGGATTGGGGATATGGCCACGAAGATGGCAGACTCCCCACCAACTAAA
GAATCAGCTGCTTCCACCTTTCTCCATCTGCTAGTTGTAGCCGAATTCTACGATGTGCTG
CTAGCTCTGGTTCGACGTTTTCCTGGTTTGGCCCGGGCAGAGTTTTATGGTGACAATGAT
GATGTATCGCTTTTGAGTTTGATGGCTGAGACACCTTCTGCATTTCGGAGTGGGACTCAG
CTAGGCTTTTGGCAACGCTTACTTTATTCTGTCGCACAGGCAAACTTAGAAAGAAGATTG
TCAGACATTGAAAAGTCCTTTGTTGTAAATCAGCCCTCAGTCACAGTACCCTCAACAGAA
TCGCCACAGCCTACTAATGAGTTAACATGGGAGTGTTTCGTGAAGTATCCACGCAATTGT
GTCATCACAATTCAAGCGTGGCTTGCTAGGATGATTAATAGAGCAGCAATATTCAAGCAC
ATTAAGGATATAAAGTTAATGCATAAAGAGACTCTTGATATCGTGAAACGTCTTTGCAAG
GAGCTTATGAAAGAGTATAAACCTAAGGATATTGAGCCAGTACTCAGAAAGGCAGTTCTG
TTGGCAGCAAGTTCGGGAATTCCTGAAATCATAGAAGAAATTGTAGATTGCTACCCTGAC
GCAATTTGGTTTGTTAATTCTGAAAATCATAACTTATTTCACCTTGCGGTAATAAATCGG
CATGAAAAGGTGTTTAACTTCATATATCAGTTAAGTTTGTATAAACATTTGGTAACAACT
GATGAAGACACTTCAGGAAACAATATATTACATATGGCTGGAAAATTAGCACCTCTTGGC
CGACTCAATCTTATCTCAGGTGCAGCTTTGCAAATGCAGCGCGAACTTCAGTGGTTCCAG
GAAGTGGAAAAGTTTGTTCATCCAACTTTAAGGACAAATAGAAACTCATATGGAAAAACT
CCAAAAATGGTGTTCACTGAGGAACACAAGGAATTGGTCAAAGAAGGAGAGAAATGGATG
AAAGAAACTGCAAATTCATGCACATTTGTGGCGGCCTTAACAGCAACGGTAGGATTTGCA
GCAGCCATCACTGTACCAGGAGGAAATCAAAGCAAAGGTTTCCCAATCTTCTCAAAAGAA
CCGGCCTTCACGATTTTTGCTGTTTCGGTTGCATTCTGTCTGTTCTCTTCTGTTGCCTCT
GTGCTAATGTTTTTGTCTATCCTCACCGCGAGATATGCAGAAACAGATTTTCTTAGATCT
CTTCCAAAACGATTAATTATAGGCCTCGGTACACTGTTTATTTCAATGACATCTCTGATG
ATAGCATTTGGTGCTACAATTTATCTCGTTTTCGGTCAGAAAAACGGACTGATACTCATT
CCAGTGGGCATAGCAGGCCTCATTCCAGTAATCCTATTTGAGTCCTTGCAATTTCGTCTC
TTGTTAGATATGTGTATGTCCACATATGGCCCAAGCATTTTTCATAAACAGAGCTCACGT
TTACTTTACTAG

Peptide Sequence

PEP ID

XP_016486411.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107806705 isoform X3 [Nicotiana tabacum]
Sequence

MENLYSLAARTNRSSFEEIGEENINEEKKLWGCLPLYRALLRENQSGFEKEAKALSKFPP
DVTICRKVTRAGDTGLHVLVGAGKWYDSVISKPKSYALEGLVIRNNNGHTPLCVAAKVGN
MEAAKKLLQLETEIRSVRATDDDTVGRYPIIEAARYGHKEMVLLWIGDMATKMADSPPTK
ESAASTFLHLLVVAEFYDVLLALVRRFPGLARAEFYGDNDDVSLLSLMAETPSAFRSGTQ
LGFWQRLLYSVAQANLERRLSDIEKSFVVNQPSVTVPSTESPQPTNELTWECFVKYPRNC
VITIQAWLARMINRAAIFKHIKDIKLMHKETLDIVKRLCKELMKEYKPKDIEPVLRKAVL
LAASSGIPEIIEEIVDCYPDAIWFVNSENHNLFHLAVINRHEKVFNFIYQLSLYKHLVTT
DEDTSGNNILHMAGKLAPLGRLNLISGAALQMQRELQWFQEVEKFVHPTLRTNRNSYGKT
PKMVFTEEHKELVKEGEKWMKETANSCTFVAALTATVGFAAAITVPGGNQSKGFPIFSKE
PAFTIFAVSVAFCLFSSVASVLMFLSILTARYAETDFLRSLPKRLIIGLGTLFISMTSLM
IAFGATIYLVFGQKNGLILIPVGIAGLIPVILFESLQFRLLLDMCMSTYGPSIFHKQSSR
LLY

Transcript Sequence

Gene sequence data has not been registered.